From brazda at fzu.cz Mon Mar 11 12:16:24 2019 From: brazda at fzu.cz (brazda) Date: Mon, 11 Mar 2019 11:16:24 +0100 Subject: [Cod-bugs] Unable to update deposited prepublication structure Message-ID: <18bdcee1f762109a03ec6ae44d22d0da@fzu.cz> Dear Sirs/Madams, I tried to update 3000217.cif, but I failed. The red error message on red background appeared "cif-deposit.pl: password 'password' value from the upload form contains unallowed characters (not in '(.{4,64})')". Could you please help me? Thank you in advance, Sincerely, Petr Brazda From andrius.merkys at gmail.com Tue Mar 12 10:25:49 2019 From: andrius.merkys at gmail.com (Andrius Merkys) Date: Tue, 12 Mar 2019 10:25:49 +0200 Subject: [Cod-bugs] Unable to update deposited prepublication structure In-Reply-To: <18bdcee1f762109a03ec6ae44d22d0da@fzu.cz> References: <18bdcee1f762109a03ec6ae44d22d0da@fzu.cz> Message-ID: Dear Petr, Could you please describe the steps you did to arrive to the deposition stage? I have tried to reproduce the situation, however, unsuccessfully. Best wishes, Andrius Merkys On 2019-03-11 12:16, brazda wrote: > Dear Sirs/Madams, > > I tried to update 3000217.cif, but I failed. The red error message on > red background appeared "cif-deposit.pl: password 'password' value > from the upload form contains unallowed characters (not in > '(.{4,64})')". Could you please help me? > > Thank you in advance, > > Sincerely, > > Petr Brazda > _______________________________________________ > Cod-bugs mailing list > Cod-bugs at lists.crystallography.net > http://lists.crystallography.net/cgi-bin/mailman/listinfo/cod-bugs -- Andrius Merkys Vilnius University Institute of Biotechnology, Saul?tekio al. 7, room V325 LT-10257 Vilnius, Lithuania From brazda at fzu.cz Tue Mar 12 11:08:04 2019 From: brazda at fzu.cz (brazda) Date: Tue, 12 Mar 2019 10:08:04 +0100 Subject: [Cod-bugs] Unable to update deposited prepublication structure In-Reply-To: References: <18bdcee1f762109a03ec6ae44d22d0da@fzu.cz> Message-ID: <3d3ca8858aa8980b25c4b72865ccdd1c@fzu.cz> Dear Andrius, I logged in for Manage depositions>view your deposition>clicked on deposited structure 3000217>clicked on Update - I was in "Validation and Deposition Interface">clicked on radio-button "Do not change the hold period" and "Begin update">clicked on "Edit">In "Your CIF file contents" window I deleted the whole text there and pasted the updated vesion of the CIF; in "Description of changes..." window I wrote "By accicent the originally deposited structure had wrong absolute structure. The updated cif corrects this error." and clicked on "Save and check">Green message appeared "File [3000217.cif] is correct" and I clicked on "Update" button and then the message appeared "cif-deposit.pl: password 'password' value from the upload form contains unallowed characters (not in '(.{4,64})')". I tried it just now with a different result. the sequence of the steps was the same but today the error message is different "cif-deposit.pl: submitting author 'Petr Br?zda' does not match any author in the data_I author list ('Brazda, P.', 'Palatinus, L.', 'Babor, M.') -- will not deposit the structure, the prepublication structures and personal communications must be deposited by one of the authors". I had problems with this yesterday too because I wrote in my personal details my surmane "Br?zda" but in cif it must be "Br\'azda". Therefore I changed my profile to "Brazda" and also changed the CIF to "Brazda". Now everything is ok, but the message still appears. Then I tried the whole procedure again but this time I did not delete the whole text in the "Your CIF file contents" window but only the title, atomic coordinates and also the non-recognized words part. Then I clicked on update and the same error message as yesterday appeared. I attach printscreen of it. Best wishes, Petr Brazda Dne 2019-03-12 09:25, Andrius Merkys napsal: > Dear Petr, > > Could you please describe the steps you did to arrive to the deposition > stage? I have tried to reproduce the situation, however, > unsuccessfully. > > Best wishes, > Andrius Merkys > > On 2019-03-11 12:16, brazda wrote: >> Dear Sirs/Madams, >> >> I tried to update 3000217.cif, but I failed. The red error message on >> red background appeared "cif-deposit.pl: password 'password' value >> from the upload form contains unallowed characters (not in >> '(.{4,64})')". Could you please help me? >> >> Thank you in advance, >> >> Sincerely, >> >> Petr Brazda >> _______________________________________________ >> Cod-bugs mailing list >> Cod-bugs at lists.crystallography.net >> http://lists.crystallography.net/cgi-bin/mailman/listinfo/cod-bugs -------------- next part -------------- A non-text attachment was scrubbed... Name: printscreen.tif Type: image/tiff Size: 3508264 bytes Desc: not available URL: From andrius.merkys at gmail.com Tue Mar 12 14:15:03 2019 From: andrius.merkys at gmail.com (Andrius Merkys) Date: Tue, 12 Mar 2019 14:15:03 +0200 Subject: [Cod-bugs] Unable to update deposited prepublication structure In-Reply-To: <3d3ca8858aa8980b25c4b72865ccdd1c@fzu.cz> References: <18bdcee1f762109a03ec6ae44d22d0da@fzu.cz> <3d3ca8858aa8980b25c4b72865ccdd1c@fzu.cz> Message-ID: Dear Petr, Thanks a lot for detail description of the problem. It helped me to understand the problem, however, it will take some time to fix it and push to the server. Meanwhile, could you try logging out and in again to the same session? In my case this helped to get around the problem. Hope this helps, Andrius On 2019-03-12 11:08, brazda wrote: > Dear Andrius, > > I logged in for Manage depositions>view your deposition>clicked on > deposited structure 3000217>clicked on Update - I was in "Validation > and Deposition Interface">clicked on radio-button "Do not change the > hold period" and "Begin update">clicked on "Edit">In "Your CIF file > contents" window I deleted the whole text there and pasted the updated > vesion of the CIF; in "Description of changes..." window I wrote "By > accicent the originally deposited structure had wrong absolute > structure. The updated cif corrects this error." and clicked on "Save > and check">Green message appeared "File [3000217.cif] is correct" and > I clicked on "Update" button and then the message appeared > "cif-deposit.pl: password 'password' value from the upload form > contains unallowed characters (not in '(.{4,64})')". > > I tried it just now with a different result. > the sequence of the steps was the same but today the error message is > different "cif-deposit.pl: submitting author 'Petr Br?zda' does not > match any author in the data_I author list ('Brazda, P.', 'Palatinus, > L.', 'Babor, M.') -- will not deposit the structure, the > prepublication structures and personal communications must be > deposited by one of the authors". I had problems with this yesterday > too because I wrote in my personal details my surmane "Br?zda" but in > cif it must be "Br\'azda". Therefore I changed my profile to "Brazda" > and also changed the CIF to "Brazda". Now everything is ok, but the > message still appears. > > Then I tried the whole procedure again but this time I did not delete > the whole text in the "Your CIF file contents" window but only the > title, atomic coordinates and also the non-recognized words part. Then > I clicked on update and the same error message as yesterday appeared. > I attach printscreen of it. > > Best wishes, > > Petr Brazda > > > > > Dne 2019-03-12 09:25, Andrius Merkys napsal: >> Dear Petr, >> >> Could you please describe the steps you did to arrive to the deposition >> stage? I have tried to reproduce the situation, however, unsuccessfully. >> >> Best wishes, >> Andrius Merkys >> >> On 2019-03-11 12:16, brazda wrote: >>> Dear Sirs/Madams, >>> >>> I tried to update 3000217.cif, but I failed. The red error message on >>> red background appeared "cif-deposit.pl: password 'password' value >>> from the upload form contains unallowed characters (not in >>> '(.{4,64})')". Could you please help me? >>> >>> Thank you in advance, >>> >>> Sincerely, >>> >>> Petr Brazda >>> _______________________________________________ >>> Cod-bugs mailing list >>> Cod-bugs at lists.crystallography.net >>> http://lists.crystallography.net/cgi-bin/mailman/listinfo/cod-bugs -- Andrius Merkys Vilnius University Institute of Biotechnology, Saul?tekio al. 7, room V325 LT-10257 Vilnius, Lithuania From andrius.merkys at gmail.com Tue Mar 12 15:01:06 2019 From: andrius.merkys at gmail.com (Andrius Merkys) Date: Tue, 12 Mar 2019 15:01:06 +0200 Subject: [Cod-bugs] Unable to update deposited prepublication structure In-Reply-To: References: <18bdcee1f762109a03ec6ae44d22d0da@fzu.cz> <3d3ca8858aa8980b25c4b72865ccdd1c@fzu.cz> Message-ID: <600461c9-d045-532f-d8fb-afa5bb3b06be@gmail.com> Dear Petr, Glad to hear it worked! I will fix the problem ASAP. We are also aware about the problem with diacritics in author names, and will try to sort it out. Many thanks, Andrius On 2019-03-12 14:38, brazda wrote: > I tried it and it worked! I was able to update the structure with the > partial changes in the "Your CIF file contents" window. When I deleted > the whole text and pasted the correct version of the CIF the error > message with 'Brazda' and 'Br?zda' appeared. So thank you very much > for your help. -- Andrius Merkys Vilnius University Institute of Biotechnology, Saul?tekio al. 7, room V325 LT-10257 Vilnius, Lithuania