[Cod-bugs] Download using subversion or rsync not working
Andrius Merkys
andrius.merkys at gmail.com
Fri Jul 24 13:58:00 EEST 2020
Hi Noel,
On 2020-07-23 18:16, Noel O'Boyle wrote:
> Could I ask an additional question - the sync is in progress, but I'm
> wondering whether it will include SMILES for the molecules? This is
> really what I'm interested in, so I'm wondering do I have to do that
> conversion myself. If so, what conversion procedure do you recommend?
rsync for rsync://www.crystallography.net/cif/ will download only CIF
files. You can download the whole COD SMILES collection as a single file
from here:
https://www.crystallography.net/cod/smi/allcod.smi
These are manually curated SMILES descriptors, derived
semi-automatically as a result of an ongoing project led by Miguel
Quirós Olozábal. The process of their derivation is described in detail
in Quirós et al. 2018, doi:10.1186/s13321-018-0279-6.
Hope this helps,
Andrius
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