[Cod-bugs] COD Data registration

Saulius Gražulis grazulis at ibt.lt
Mon Apr 28 12:00:46 EEST 2025


Dear Dr. Sasaki,

than you once more for your depositions and for the thorough 
information, and my apologies that it took so long to respond.

Your very interesting structures and comprehensive documentation in XRDa 
prompted us tu update the Crystallography Open Database and to include 
links to the original Raw Diffraction Data. With your three records, we 
start officially accepting links to the Raw Data Depositions :). Please 
have a look if the records we inserted are as you intended:

https://www.crystallography.net/cod/3000559.html
https://www.crystallography.net/cod/3000560.html
https://www.crystallography.net/cod/3000561.html
https://www.crystallography.net/cod/3000562.html

Sincerely yours,
Saulius

PS. With our new COD database, you can insert the XRDa links into your 
new depositions like this:

> loop_
> _cod_related_entry_id
> _cod_related_entry_database
> _cod_related_entry_code
> _cod_related_entry_description
> 1 XRDa 00999 DOI:10.51093/xrd-00999

where '00999' should be replaced by the actual identifier assigned by XRDa.

With these lines the links to XRDa will be added automatically.

PPS. Meanwhile, we will go through your other records, starting with COD 
3000450, and will insert XRDa links and other information when needed. I 
will send you the links to these files after the updates.

S.G.

On 2025-01-24 08:49, Toshiyuki Sasaki wrote:
>
> Dear Dr. Saulius Gražulis,
>
> The deposited CIF files (COD accession codes: 3000559–3000562) were 
> just released into publicly accessible repositories as published data 
> by adding publication information.
>
> Published paper
>
> Chem. Eur. J.  2025, 31, e202403427
>
> DOI:    10.1002/chem.202403427
>
> Link: 
> https://chemistry-europe.onlinelibrary.wiley.com/doi/10.1002/chem.202403427
>
> Here are DOI of XRDa (Xtal Raw Data Archive) and CCDC number:
>
> 3000559
>
> XRDa
>
> DOI:      10.51093/xrd-00269
>
> Link: https://xrda.pdbj.org/entry/269
>
> CCDC: 2376461
>
> 3000560
>
> XRDa
>
> DOI:      10.51093/xrd-00264
>
> Link: https://xrda.pdbj.org/entry/264
>
> CCDC: 2376462
>
> 3000561
>
> XRDa
>
> DOI: 10.51093/xrd-00265
>
> Link: https://xrda.pdbj.org/entry/265
>
> CCDC: 2376463
>
> 3000562
>
> XRDa: Not registered
>
> CCDC: 2376598
>
> Sincerely yours,
>
> Toshiyuki Sasaki
>
> **************************************************************
>
> 公益財団法人高輝度光科学研究センター
>
> (Japan Synchrotron Radiation Research Institute(JASRI))
>
> 回折・散乱推進室(Diffraction and Scattering Division)
>
> テニュアトラック研究員(Tenure-track researcher)
>
> 佐々木 俊之(Dr. Toshiyuki Sasaki)
>
> TEL: 050-3502-3649 (63430)
>
> 〒679-5198 兵庫県佐用郡佐用町光都1丁目1番1号
>
> (1-1-1, Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5198 Japan)
>
> **************************************************************
>
>
> -- 
> This message has been scanned for viruses and
> dangerous content by *MailScanner* <http://www.mailscanner.info/>, and is
> believed to be clean. 


-- 
Dr. Saulius Gražulis
Vilnius University Institute of Biotechnology, Saulėtekio al. 7
LT-10257 Vilnius, Lietuva (Lithuania)
mobile: (+370-684)-49802, (+370-614)-36366

-- 
This message has been scanned for viruses and
dangerous content by MailScanner, and is
believed to be clean.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.crystallography.net/pipermail/cod-bugs/attachments/20250428/da12aa0d/attachment.htm>


More information about the Cod-bugs mailing list