[Cod-bugs] Missing Journal Information

[Robert McMeeking - STFC UKRI]

Hello Saulius

I have been away on holiday and accessing the various files has been more of a problem than I anticipated. I am back now, but for various reasons may access is more restricted than I had hoped.

However, I have managed to generate a .tsv file, which I include as an attachment.

I downloaded the details from CrossRef searching on DOIs

The fields in the .tsv are:

  1.  COD Collection code
  2.  Article identifier
  3.  Journal Vol
  4.  Journal Issue
  5.  Start page no
  6.  End page no
  7.  Journal Title
IUCr has Article identified but no page numbers as far as I can see
Acta Cryst E has no article identifier
I have edited the full title for Acta Cryst E to correspond to what I believe you normally use.

I hope this is helpful!

Best Regards

Bob

From: Saulius Gražulis <grazulis at ibt.lt>
Sent: 19 June 2025 09:53
To: McMeeking, Robert (STFC,DL,SC) <robert.mcmeeking at stfc.ac.uk>; 'Antanas Vaitkus' <antanas.vaitkus90 at gmail.com>
Cc: 'cod-bugs at ibt.lt' <cod-bugs at ibt.lt>
Subject: Re: [Cod-bugs] Missing Journal Information

On 2025-06-19 11:06, Robert McMeeking - STFC UKRI wrote:
I do appreciate that getting the full bibliography details is not the major COD priority, especially when a DOI link is available. But have you had any further thoughts on the entries linked to in my previous email?

I was thinking of making some more checks.


If you could convert that information to a .patch file (diff) against the existing COD CIF, we could then apply it and commit after the check. Is that a lot of work on your side? Alternatively, can you generate the information in some machine readable form (CSV or TSV preferred)?

Regards,
Saulius

--

Dr. Saulius Gražulis

Vilnius University Institute of Biotechnology, Saulėtekio al. 7

LT-10257 Vilnius, Lietuva (Lithuania)

mobile: (+370-684)-49802, (+370-614)-36366

--
This message has been scanned for viruses and
dangerous content by MailScanner<http://www.mailscanner.info/>, and is
believed to be clean.

-- 
This message has been scanned for viruses and
dangerous content by MailScanner, and is
believed to be clean.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.crystallography.net/pipermail/cod-bugs/attachments/20250702/6c547f49/attachment-0001.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: cod_notitle_2.tsv
Type: text/tab-separated-values
Size: 1615 bytes
Desc: cod_notitle_2.tsv
URL: <http://lists.crystallography.net/pipermail/cod-bugs/attachments/20250702/6c547f49/attachment-0001.tsv>