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<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Hello COD Crew,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">This is Thomas Degen from Malvern Panalytical. We typically update the Search/Match database which is calculated from the COD database once a year.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Can someone please advice me, what’s the best way to upload this latest Search/Match Database based on the COD from this May? <o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">This is (in the meantime) a 7.1 GByte SQLite database file.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Many Thanks and best regards,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Thomas Degen<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
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From:</span></b><span lang="EN-US"> Thomas Degen <br>
<b>Sent:</b> Wednesday, May 8, 2024 1:29 PM<br>
<b>To:</b> Saulius Gražulis <grazulis@ibt.lt><br>
<b>Subject:</b> RE: New Release of Search/Match database for Panalytical HighScore(Plus) SW<o:p></o:p></span>
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<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Hello Saulius,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Its more than a year ago that we updated the MP COD Search/Match database.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">I have just compiled a new one, using the COD data from May 5<sup>th</sup>.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">How can I send you that big file, is it still the same options or is there something changed/new?<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Thank’s and best regards,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Thomas<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span lang="EN-US">From:</span></b><span lang="EN-US"> Saulius Gražulis <<a href="mailto:grazulis@ibt.lt">grazulis@ibt.lt</a>>
<br>
<b>Sent:</b> Monday, March 20, 2023 12:44 PM<br>
<b>To:</b> Thomas Degen <<a href="mailto:thomas.degen@malvernpanalytical.com">thomas.degen@malvernpanalytical.com</a>><br>
<b>Subject:</b> Re: New Release of Search/Match database for Panalytical HighScore(Plus) SW<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">On 2023-03-17 17:49, Thomas Degen wrote:<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">This is Thomas Degen from Malvern Panalytical headquarters in Almelo, the Netherlands.<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">I think previously you were in contact with my colleague Thomas Dortmann, concerning the Search/Match version<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Of the COD database for MP HighScore(Plus) software. Thomas Dortmann retired last year and now I would like to upload a
<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">New version of the Search/Match database, to make it available for our users on your website.<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">This new version is based on the COD of February this year.<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Do you maybe have an upload facility for such huge files?
<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">The SQlite (Search/Match) database file is around 7GByte.<o:p></o:p></p>
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<p>You can send me the files using the following options:<o:p></o:p></p>
<p>1) using anonymous FTP on my server, 'saulius.grazulis.lt' (I have to use my own server since our university has blocked the incoming traffic to FTP port at the moment). Since my server is behind the firewall, please use PASSIVE FTP mode to upload the files.
An example upload session using a CLI ftp client is provided [1].<o:p></o:p></p>
<p>2) Using 'rsync' to an ssh account. To use this option, please send me your ssh public key (~/.ssh/id_rsa.pub or equivalent file), I will add an account for you and send the ssh login credentials (user name and server name);<o:p></o:p></p>
<p>3) you can place the files on any HTTP(S) server accessible to you and send me the URL of the file(s); I will download them.<o:p></o:p></p>
<p>Please let me know which option is the most suitable for you.<o:p></o:p></p>
<p>In any case, please send me the list of the files to be published together with their crypto-checksums (SAH256), and possibly file sizes, so that I can double check the uploads. If there are any problems, please let me know and I'll do my best to help resolving
them.<o:p></o:p></p>
<p>Sincerely yours,<br>
Saulius<o:p></o:p></p>
<p>Refs.:<o:p></o:p></p>
<p>[1] An example upload session to the 'saulius.grazulis.lt' FTP server. The <b>
<i><span style="font-family:"Courier New"">bold italic monospaced</span> </i></b>text is typed by the client operator (in the example case, by me):<o:p></o:p></p>
<blockquote style="margin-top:5.0pt;margin-bottom:5.0pt">
<p class="MsoNormal"><span style="font-family:"Courier New"">saulius@tasmanijos-velnias ~/ $
<b><i>ftp saulius.grazulis.lt</i></b><br>
Connected to saulius.grazulis.lt.<br>
220 ProFTPD 1.3.5b Server (Debian) [::ffff:192.168.1.111]<br>
Name (saulius.grazulis.lt:saulius): <b><i>anonymous</i></b><br>
331 Anonymous login ok, send your complete email address as your password<br>
Password:<b><i><a href="mailto:grazulis@ibt.lt">grazulis@ibt.lt</a></i></b><br>
230-Welcome, archive user <a href="mailto:anonymous@78-60-2-35.static.zebra.lt">anonymous@78-60-2-35.static.zebra.lt</a> !<br>
230-<br>
230-The local time is: Mon Mar 20 11:31:05 2023<br>
230-<br>
230-This is an experimental FTP server. If you have any unusual problems,<br>
230-please report them via e-mail to <root@jonvabalis>.<br>
230-<br>
230 Anonymous access granted, restrictions apply<br>
Remote system type is UNIX.<br>
Using binary mode to transfer files.<br>
ftp> <b><i>cd incoming</i></b><br>
250 CWD command successful<br>
ftp> <b><i>bin</i></b><br>
200 Type set to I<br>
ftp> <b><i>pass</i></b><br>
Passive mode on.<br>
ftp> <b><i>hash</i></b><br>
Hash mark printing on (1024 bytes/hash mark).<br>
ftp> <b><i>put stack-x86.ora</i></b><br>
local: stack-x86.ora remote: stack-x86.ora<br>
227 Entering Passive Mode (78,62,46,183,165,93).<br>
150 Opening BINARY mode data connection for stack-x86.ora<br>
##############...<br>
226 Transfer complete<br>
6893812 bytes sent in 0.92 secs (7.1113 MB/s)<br>
ftp> <b><i>quit</i></b><br>
221 Goodbye.</span><o:p></o:p></p>
</blockquote>
<p><o:p> </o:p></p>
<pre>-- <o:p></o:p></pre>
<pre>Dr. Saulius Gražulis<o:p></o:p></pre>
<pre>Vilnius University, Life Science Center, Institute of Biotechnology<o:p></o:p></pre>
<pre>Saulėtekio al. 7, LT-10257 Vilnius, Lietuva (Lithuania)<o:p></o:p></pre>
<pre>phone (office): (+370-5)-2234353, mobile: (+370-684)-49802, (+370-614)-36366<o:p></o:p></pre>
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