From grazulis at ibt.lt  Mon Nov 28 15:54:34 2016
From: grazulis at ibt.lt (=?UTF-8?Q?Saulius_Gra=c5=beulis?=)
Date: Mon, 28 Nov 2016 15:54:34 +0200
Subject: [TCOD] SAUC database with COD cells
In-Reply-To: <CABcsX27j6Ugs4TpCHiCRJyijd82VW-BdZhZQsNoz-iq+f-6tpA@mail.gmail.com>
References: <CABcsX27j6Ugs4TpCHiCRJyijd82VW-BdZhZQsNoz-iq+f-6tpA@mail.gmail.com>
Message-ID: <8b18383c-2ae1-bf00-fb0d-37b50b3e5b1d@ibt.lt>

Dear Herbert,

thanks for you e-mail!

On 2016-11-27 19:26, Herbert J. Bernstein wrote:
>   You may find the cell search at
> 
>   http://iterate.sf.net/sauc/
> 
> interesting.  We have added all the COD cells to the PDB cells that we
> had before.

Indeed, this is a very interesting development. I glad you find COD
useful and mention it in your work. Actually, we would need search for
reduced cell in COD as well, so your method is very interesting for us!
I'm CC-ing out Advisory Board to have a closer look.

Cheers,
Saulius

-- 
Dr. Saulius Gražulis
Vilnius University Institute of Biotechnology, Saulėtekio al. 7
LT-10223 Vilnius, Lietuva (Lithuania)
fax: (+370-5)-2234367 / phone (office): (+370-5)-2234353
mobile: (+370-684)-49802, (+370-614)-36366

From yayahjb at gmail.com  Mon Nov 28 16:13:11 2016
From: yayahjb at gmail.com (Herbert J. Bernstein)
Date: Mon, 28 Nov 2016 09:13:11 -0500
Subject: [TCOD] SAUC database with COD cells
In-Reply-To: <8b18383c-2ae1-bf00-fb0d-37b50b3e5b1d@ibt.lt>
References: <CABcsX27j6Ugs4TpCHiCRJyijd82VW-BdZhZQsNoz-iq+f-6tpA@mail.gmail.com>
 <8b18383c-2ae1-bf00-fb0d-37b50b3e5b1d@ibt.lt>
Message-ID: <CABcsX26u5o1hoarchGnBayG4a3JQH60zwWSzDk5qTE1jVkP9hA@mail.gmail.com>

Dear Saulius,

  If you would like to set up your server to include this database, I would
be happy to help you get it installed.  It fits most naturally in a
multi-core linux system.  The multiple cores are not needed to do the
searches but they are important to keep the database build time
reasonable.

  Regards,
    Herbert

On Mon, Nov 28, 2016 at 8:54 AM, Saulius Gražulis <grazulis at ibt.lt> wrote:

> Dear Herbert,
>
> thanks for you e-mail!
>
> On 2016-11-27 19:26, Herbert J. Bernstein wrote:
> >   You may find the cell search at
> >
> >   http://iterate.sf.net/sauc/
> >
> > interesting.  We have added all the COD cells to the PDB cells that we
> > had before.
>
> Indeed, this is a very interesting development. I glad you find COD
> useful and mention it in your work. Actually, we would need search for
> reduced cell in COD as well, so your method is very interesting for us!
> I'm CC-ing out Advisory Board to have a closer look.
>
> Cheers,
> Saulius
>
> --
> Dr. Saulius Gražulis
> Vilnius University Institute of Biotechnology, Saulėtekio al. 7
> LT-10223 Vilnius, Lietuva (Lithuania)
> fax: (+370-5)-2234367 / phone (office): (+370-5)-2234353
> mobile: (+370-684)-49802, (+370-614)-36366
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.crystallography.net/pipermail/tcod/attachments/20161128/6737ba21/attachment.html>